I-interpret is an efficient "interpreter" of chemical structures, which can automatically interpret the chemical structure of a given organic molecule merely from its essential structural information, including element identities and three-dimensional coordinates of its component atoms. I-interpret was tested on thousands of small organic molecules and achieved a high success rate in interpreting their correct chemical structures. It can serve as a valuable tool for processing chemical structures in various molecular modeling studies, especially for high-throughput projects such as processing large databases of organic molecules.          [user manual]
input file name:
input file format:
output file name:
output file format:
Parameters
Protonation state Neutral form Charged form
add hydrogens Yes No
output largest substructure Yes No
I-interpret version: v1.1.   Latest update on 2007/12/05.
Reference:
 Yuan Zhao, Tiejun Cheng, and Renxiao Wang*
Automatic Perception of Organic Molecules Based on Essential Structural Information
J. Chem. Inf. Model. 2007, 47, 1379-1385
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